PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008236491.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 314aa    MW: 33628.9 Da    PI: 6.7123
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008236491.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-13109156455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk Lq
  XP_008236491.1 109 MHIWTERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 156
                     56678*********************6....39******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-16104172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.005105155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-15108167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.41E-11108152No hitNo description
PfamPF000109.2E-11110156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-9113161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048738.96E-4239278No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MSGGETGGFS EGFLWENQSW ANLSNNSDNS VGAGDEDKNL GNKEETAVMG ISTEGHNQVP  60
PAPGKKRRGG GGVGKNGIIK GSTSPADKGK GSTGAGDGGG GGESDDHEMH IWTERERRKK  120
MRNMFANLHA LLPQLPPKAD KSTIVDEAVN YIKTLQQTLQ KLQKQKLERL QGATTINFDP  180
SILTPQNVAF GSREEFLANH GAAAINPSNS LLTSHCGPVN FQTWTTPNVV LNICGDEAQI  240
SVCCPKKAGL LSAICFVLEK YKLGVMSAHV SSDCNRSMYM IQAHARGAPD QFLETFPADE  300
IFKQAAAEII LMLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008236491.10.0PREDICTED: transcription factor bHLH95
SwissprotQ9FXA31e-59BH095_ARATH; Transcription factor bHLH95
TrEMBLM5VHD61e-169M5VHD6_PRUPE; Uncharacterized protein
STRINGVIT_03s0063g00170.t011e-119(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-44bHLH family protein